STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07166.1Possible flagellar switch protein FliM; COG0477 Permeases of the major facilitator superfamily. (310 aa)    
Predicted Functional Partners:
EAQ07421.1
Flagellar motor switch FliN protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 0.998
EAQ05274.1
COG1536 Flagellar motor switch protein.
 
 0.996
EAQ07428.1
Probable flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 0.993
EAQ07899.1
Chemotaxis response regulator; COG0784 FOG: CheY-like receiver.
  
 0.978
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.964
EAQ07429.1
Flagellar FliF M-ring protein; COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein.
  
 0.942
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 0.931
EAQ08165.1
COG3144 Flagellar hook-length control protein.
 
  
 0.930
EAQ07423.1
Flagellar biosynthesis protein, FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.911
EAQ07427.1
Hypothetical protein; COG1317 Flagellar biosynthesis/type III secretory pathway protein.
  
 
 0.905
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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