STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07169.1YeeE/YedE family protein; COG2391 Predicted transporter component. (141 aa)    
Predicted Functional Partners:
EAQ07168.1
YeeE/YedE family protein; COG2391 Predicted transporter component.
 
     0.965
EAQ07170.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.924
EAQ07167.1
COG3453 Uncharacterized protein conserved in bacteria.
 
     0.873
EAQ05435.1
COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.514
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
   
    0.456
EAQ07264.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
    0.452
EAQ05704.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
  
 0.431
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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