Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ07174.1Hypothetical protein; COG3173 Predicted aminoglycoside phosphotransferase. (347 aa)    
Predicted Functional Partners:
EAQ07173.1
COG1960 Acyl-CoA dehydrogenases.
  0.992
EAQ05602.1
COG1960 Acyl-CoA dehydrogenases.
 
  0.877
EAQ07916.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /3-hydroxybutyryl-CoA epimerase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.640
EAQ07039.1
Oxidoreductase, zinc-binding dehydrogenase family; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  0.571
EAQ07088.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
  0.532
EAQ06670.1
Oxidoreductase, zinc-binding dehydrogenase family; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  0.499
EAQ07677.1
Phosphoglycerate mutase family protein; COG0406 Fructose-2,6-bisphosphatase.
 
    0.488
rsgA
Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
    
  0.477
EAQ05928.1
Hypothetical protein; COG1564 Thiamine pyrophosphokinase.
    
  0.472
EAQ06298.1
Putative thiamine-phosphate pyrophosphorylase; COG0352 Thiamine monophosphate synthase.
     
  0.467
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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