Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07205.1Peptidoglycan-binding protein, putative; COG2951 Membrane-bound lytic murein transglycosylase B. (311 aa)    
Predicted Functional Partners:
EAQ06082.1
Probable penicillin-binding protein; COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
   
 0.499
EAQ07855.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 
 0.469
EAQ05202.1
COG0837 Glucokinase; Belongs to the bacterial glucokinase family.
  
  
  0.457
EAQ07206.1
Possible glycosyltransferase; COG0500 SAM-dependent methyltransferases.
       0.418
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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