Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07222.1Asp/Glu/Hydantoin racemase family protein; COG3473 Maleate cis-trans isomerase. (240 aa)    
Predicted Functional Partners:
EAQ07223.1
Metallopeptidase, family M24; COG0006 Xaa-Pro aminopeptidase.
 
     0.947
EAQ07224.1
Diaminopropionate ammonia-lyase; COG1171 Threonine dehydratase.
 
     0.944
EAQ06245.1
Isochorismatase family protein; COG1335 Amidases related to nicotinamidase.
    
 0.827
EAQ06783.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.818
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
  0.815
argG
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.815
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.815
EAQ06744.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
     
  0.815
EAQ06781.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
     
  0.815
EAQ06782.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
     
  0.815
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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