STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07229.1Hypothetical protein; COG1129 ABC-type sugar transport system, ATPase component. (263 aa)    
Predicted Functional Partners:
EAQ07227.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.995
EAQ07228.1
ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.984
EAQ06198.1
Permease protein of sugar ABC transporter; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.911
EAQ07226.1
Hypothetical protein; COG1940 Transcriptional regulator/sugar kinase.
 
     0.850
EAQ07187.1
Sugar (ribose) ABC transporter (permease); COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.828
EAQ06197.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.808
EAQ05823.1
COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.803
EAQ05824.1
ABC sugar (xylose) transporter, periplasmic binding protein; COG4213 ABC-type xylose transport system, periplasmic component.
 
 
 0.719
EAQ07186.1
Putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.680
EAQ07184.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
  0.621
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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