STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07253.1Hypothetical protein; COG0714 MoxR-like ATPases. (300 aa)    
Predicted Functional Partners:
EAQ07254.1
COG3552 Protein containing von Willebrand factor type A (vWA) domain.
 
     0.937
EAQ07259.1
COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
   
 0.839
EAQ07258.1
COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
     0.831
EAQ07256.1
COG0303 Molybdopterin biosynthesis enzyme.
 
     0.811
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
  
 
 0.765
EAQ07058.1
Carbon monoxide dehydrogenase operon G protein.
 
     0.760
EAQ07255.1
XdhC/CoxI family protein; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
     0.750
EAQ06928.1
COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
     0.710
EAQ07257.1
COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
   
 0.558
EAQ07252.1
COG1960 Acyl-CoA dehydrogenases.
       0.541
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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