STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07272.1COG0584 Glycerophosphoryl diester phosphodiesterase. (401 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.896
EAQ06649.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
     
 0.877
EAQ07138.1
Hydrolase, alpha/beta fold family; COG2267 Lysophospholipase.
    
 0.861
EAQ06066.1
COG0578 Glycerol-3-phosphate dehydrogenase.
  
 0.792
EAQ05288.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
 
 0.619
EAQ07271.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
       0.593
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.578
EAQ07273.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
       0.576
EAQ06612.1
COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.537
EAQ07798.1
Hypothetical protein; COG3211 Predicted phosphatase.
   
 
 0.533
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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