Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07291.1Hypothetical protein. (1110 aa)    
Predicted Functional Partners:
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.853
EAQ07290.1
AhpC/TSA family protein; COG1225 Peroxiredoxin.
       0.710
EAQ06810.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
 
     0.706
EAQ07293.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.667
EAQ07648.1
Hypothetical protein.
 
   
 0.648
EAQ07791.1
Hypothetical protein.
  
     0.629
EAQ07289.1
Peptidase, M23/M37 family; COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.621
EAQ05458.1
Tellurite resistance protein.
  
     0.613
EAQ06102.1
COG3333 Uncharacterized protein conserved in bacteria.
  
     0.587
EAQ06402.1
Hypothetical protein.
  
     0.583
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.