STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07291.1Hypothetical protein. (1110 aa)    
Predicted Functional Partners:
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.855
EAQ07290.1
AhpC/TSA family protein; COG1225 Peroxiredoxin.
       0.713
EAQ06810.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
 
     0.706
EAQ07648.1
Hypothetical protein.
 
   
 0.661
EAQ07791.1
Hypothetical protein.
  
     0.629
EAQ07293.1
Membrane protein, putative; COG0477 Permeases of the major facilitator superfamily.
       0.614
EAQ05458.1
Tellurite resistance protein.
  
     0.613
EAQ06102.1
COG3333 Uncharacterized protein conserved in bacteria.
  
     0.587
EAQ06402.1
Hypothetical protein.
  
     0.583
EAQ06211.1
Hypothetical protein.
  
     0.581
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.