STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07309.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EAQ07310.1
Hypothetical protein.
 
    0.899
EAQ07842.1
Lipolytic enzyme, G-D-S-L family; COG2755 Lysophospholipase L1 and related esterases.
   
 0.813
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.739
EAQ07307.1
COG0021 Transketolase; Belongs to the transketolase family.
       0.716
EAQ07506.1
Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains.
  
    0.630
EAQ05917.1
Hypothetical protein.
  
     0.628
EAQ07554.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
     0.583
EAQ06231.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.577
EAQ07308.1
Hypothetical protein.
       0.572
EAQ07550.1
Hypothetical protein; COG3893 Inactivated superfamily I helicase.
  
    0.544
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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