STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05201.1Sensory box sensor histidine kianse/response regulator; COG0642 Signal transduction histidine kinase. (748 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
0.992
EAQ08009.1
COG0642 Signal transduction histidine kinase.
 
0.971
EAQ06517.1
COG0840 Methyl-accepting chemotaxis protein.
 
 0.951
EAQ06858.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
 0.951
EAQ06001.1
Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
  
 0.950
EAQ07008.1
Two component diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 0.949
EAQ06345.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
 0.945
EAQ06294.1
Hypothetical protein.
  
 0.942
EAQ06392.1
Nitrogen regulation protein NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific.
  
 0.940
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
  
 0.937
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.