STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05204.1COG1609 Transcriptional regulators. (367 aa)    
Predicted Functional Partners:
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
    
 
 0.952
EAQ05203.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
 
  
 0.894
EAQ05205.1
ABC alpha-glucoside transporter, perplasmic substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
   
 0.855
EAQ05202.1
COG0837 Glucokinase; Belongs to the bacterial glucokinase family.
 
    0.853
EAQ07789.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
   
 
 0.826
EAQ05208.1
Hypothetical protein; COG0366 Glycosidases.
 
 
 0.823
EAQ05206.1
ABC alpha-glucoside transporter, inner membrane subunit AglF; COG1175 ABC-type sugar transport systems, permease components.
 
     0.806
EAQ05207.1
ABC alpha-glucoside transporter, inner membrane subunit AglG; COG0395 ABC-type sugar transport system, permease component.
 
   
 0.784
EAQ08263.1
COG1609 Transcriptional regulators.
  
     0.535
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
 
 0.515
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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