Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05211.1 | EAQ05212.1 | SKA53_03309 | SKA53_03314 | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | 0.992 |
| EAQ05211.1 | EAQ05213.1 | SKA53_03309 | SKA53_03319 | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | Hypothetical protein. | 0.962 |
| EAQ05211.1 | EAQ05214.1 | SKA53_03309 | SKA53_03324 | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | 0.695 |
| EAQ05211.1 | rlmE | SKA53_03309 | SKA53_03329 | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.637 |
| EAQ05212.1 | EAQ05211.1 | SKA53_03314 | SKA53_03309 | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | 0.992 |
| EAQ05212.1 | EAQ05213.1 | SKA53_03314 | SKA53_03319 | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | Hypothetical protein. | 0.961 |
| EAQ05212.1 | EAQ05214.1 | SKA53_03314 | SKA53_03324 | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | 0.684 |
| EAQ05212.1 | EAQ07771.1 | SKA53_03314 | SKA53_13078 | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.413 |
| EAQ05212.1 | rlmE | SKA53_03314 | SKA53_03329 | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.635 |
| EAQ05213.1 | EAQ05211.1 | SKA53_03319 | SKA53_03309 | Hypothetical protein. | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | 0.962 |
| EAQ05213.1 | EAQ05212.1 | SKA53_03319 | SKA53_03314 | Hypothetical protein. | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | 0.961 |
| EAQ05213.1 | EAQ05214.1 | SKA53_03319 | SKA53_03324 | Hypothetical protein. | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | 0.719 |
| EAQ05213.1 | rlmE | SKA53_03319 | SKA53_03329 | Hypothetical protein. | Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.651 |
| EAQ05214.1 | EAQ05211.1 | SKA53_03324 | SKA53_03309 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | Hypothetical protein; COG1410 Methionine synthase I, cobalamin-binding domain. | 0.695 |
| EAQ05214.1 | EAQ05212.1 | SKA53_03324 | SKA53_03314 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | MetF-like protein; COG0685 5,10-methylenetetrahydrofolate reductase. | 0.684 |
| EAQ05214.1 | EAQ05213.1 | SKA53_03324 | SKA53_03319 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | Hypothetical protein. | 0.719 |
| EAQ05214.1 | EAQ07069.1 | SKA53_03324 | SKA53_01696 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | 0.894 |
| EAQ05214.1 | EAQ07488.1 | SKA53_03324 | SKA53_11663 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | Mutator mutT protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. | 0.429 |
| EAQ05214.1 | EAQ07771.1 | SKA53_03324 | SKA53_13078 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.901 |
| EAQ05214.1 | aroB | SKA53_03324 | SKA53_03983 | Phosphatase, Ppx/GppA family; COG0248 Exopolyphosphatase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.472 |
page 1 of 3