STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05216.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
EAQ07470.1
Hypothetical protein.
  
     0.692
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.677
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.676
EAQ07087.1
Hypothetical protein.
  
     0.656
EAQ06634.1
Hypothetical protein.
  
     0.653
EAQ06341.1
Type I secretion target repeat protein.
  
     0.647
EAQ06720.1
Hypothetical protein.
  
     0.635
EAQ05309.1
Hypothetical protein; COG0008 Glutamyl- and glutaminyl-tRNA synthetases.
  
     0.634
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
     0.627
EAQ06838.1
Hypothetical protein.
  
     0.608
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.