STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05440.1COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis. (77 aa)    
Predicted Functional Partners:
EAQ05441.1
Hypothetical protein.
       0.855
fumC
Fumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.855
EAQ05443.1
COG3814 Uncharacterized protein conserved in bacteria.
 
    0.772
EAQ05444.1
COG2059 Chromate transport protein ChrA.
       0.581
EAQ06171.1
COG2841 Uncharacterized protein conserved in bacteria.
  
     0.518
EAQ05445.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
       0.510
EAQ05964.1
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.475
EAQ07091.1
COG2960 Uncharacterized protein conserved in bacteria.
  
     0.450
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.