STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05441.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
EAQ05440.1
COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis.
       0.855
fumC
Fumarate lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.855
EAQ05443.1
COG3814 Uncharacterized protein conserved in bacteria.
       0.694
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.563
EAQ05444.1
COG2059 Chromate transport protein ChrA.
       0.546
EAQ06784.1
Hypothetical protein.
  
     0.546
EAQ05445.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
       0.510
EAQ05917.1
Hypothetical protein.
  
     0.499
EAQ06212.1
Hypothetical protein.
  
     0.486
EAQ06653.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.