STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05447.1Coproporphyrinogen III oxidase, oxygen-independent (HemN); COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (449 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.970
EAQ06077.1
COG0408 Coproporphyrinogen III oxidase.
    
 0.925
EAQ07533.1
Membrane protein, putative; COG1981 Predicted membrane protein.
 
  
 0.899
EAQ06180.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.863
EAQ06160.1
Iron-sulfur-binding protein, RdxA/RdxB/FixG family; COG0348 Polyferredoxin.
 
  
 0.857
EAQ06179.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  
 0.840
EAQ06177.1
Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.765
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
 0.695
EAQ05446.1
Coproporphyrinogen III oxidase; COG0591 Na+/proline symporter.
       0.623
EAQ05448.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.597
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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