STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05453.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
EAQ05452.1
Hypothetical protein; COG5486 Predicted metal-binding integral membrane protein.
 
     0.961
EAQ05454.1
Oxidoreductase, zinc-binding dehydrogenase family; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
       0.733
EAQ05455.1
Aminotransferase, class V; COG0520 Selenocysteine lyase.
       0.584
EAQ05456.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
       0.584
EAQ05451.1
ABC polyamine transporter, periplasmic substrate-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
       0.495
EAQ06589.1
COG2020 putative protein-S-isoprenylcysteine methyltransferase.
  
     0.430
EAQ05535.1
Dimethyl sulfoxide reductase, C subunit, putative; COG3302 DMSO reductase anchor subunit.
  
     0.426
EAQ05457.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
       0.415
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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