STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05460.1Mechanosensitive ion channel family protein; COG0471 Di- and tricarboxylate transporters. (770 aa)    
Predicted Functional Partners:
EAQ05459.1
COG0031 Cysteine synthase.
       0.855
EAQ05461.1
Hypothetical protein; COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain.
       0.842
EAQ05462.1
Probable protease precursor.
       0.782
EAQ06461.1
Membrane protein, MarC family; COG2095 Multiple antibiotic transporter.
  
    0.651
EAQ05458.1
Tellurite resistance protein.
       0.601
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
     
 0.487
EAQ05457.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
       0.477
EAQ07550.1
Hypothetical protein; COG3893 Inactivated superfamily I helicase.
  
     0.453
EAQ07742.1
COG3768 Predicted membrane protein.
  
     0.444
EAQ06720.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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