STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05462.1Probable protease precursor. (208 aa)    
Predicted Functional Partners:
EAQ05461.1
Hypothetical protein; COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain.
       0.788
EAQ05459.1
COG0031 Cysteine synthase.
       0.786
EAQ05460.1
Mechanosensitive ion channel family protein; COG0471 Di- and tricarboxylate transporters.
       0.782
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
   
 0.688
EAQ05458.1
Tellurite resistance protein.
 
     0.586
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.585
EAQ06640.1
Hypothetical protein.
  
     0.552
EAQ08079.1
Hypothetical protein.
  
     0.546
EAQ08033.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.508
EAQ06603.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
     0.502
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.