Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05469.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (311 aa)    
Predicted Functional Partners:
EAQ07314.1
Transcriptional regulator, LysR family; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.672
EAQ08245.1
Transcriptional regulatory protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.666
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
 
   
 0.655
EAQ06042.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.635
EAQ05467.1
COG2124 Cytochrome P450.
     
 0.611
EAQ05465.1
Probable high affinity sulfate transporter (SulP); COG0659 Sulfate permease and related transporters (MFS superfamily).
       0.558
EAQ05466.1
Sulfatase family protein; COG3119 Arylsulfatase A and related enzymes.
       0.558
EAQ05468.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.558
EAQ05470.1
Putative extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.505
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.448
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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