Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05485.1COG3947 Response regulator containing CheY-like receiver and SARP domains. (490 aa)    
Predicted Functional Partners:
EAQ05491.1
Metal dependent phosphohydrolase; COG1418 Predicted HD superfamily hydrolase.
 
     0.833
EAQ05489.1
Hypothetical protein; COG1418 Predicted HD superfamily hydrolase.
 
     0.826
EAQ05488.1
Hypothetical protein; COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase.
 
     0.821
EAQ05486.1
COG2124 Cytochrome P450.
 
     0.807
EAQ05484.1
Pca operon transcriptional activator PcaQ; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.781
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.781
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.775
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.775
EAQ05487.1
Hypothetical protein; COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase.
 
     0.764
EAQ05497.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.754
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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