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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05494.1Rubredoxin reductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (409 aa)    
Predicted Functional Partners:
EAQ07198.1
Putative Rieske-like ferredoxin MocE; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 0.986
EAQ08138.1
Formate dehydrogenase, alpha subunit; COG3383 Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.974
EAQ05493.1
COG0633 Ferredoxin.
 
 
 0.935
EAQ05467.1
COG2124 Cytochrome P450.
 
 
 0.918
EAQ05492.1
Probable short-chain dehydrogenase, secreted; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
  0.878
EAQ05489.1
Hypothetical protein; COG1418 Predicted HD superfamily hydrolase.
 
  
 0.870
EAQ05491.1
Metal dependent phosphohydrolase; COG1418 Predicted HD superfamily hydrolase.
 
  
 0.866
EAQ05486.1
COG2124 Cytochrome P450.
 
  
 0.801
EAQ05490.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.784
EAQ07111.1
COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.778
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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