Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ05512.1COG0025 NhaP-type Na+/H+ and K+/H+ antiporters. (412 aa)    
Predicted Functional Partners:
EAQ05511.1
Hypothetical protein; COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32).
       0.538
EAQ05694.1
Putative ribonuclease protein; COG1295 Predicted membrane protein.
 
   
 0.425
EAQ07230.1
Glutathione-regulated potassium-efflux system protein KefC, putative; COG4651 Kef-type K+ transport system, predicted NAD-binding component.
     
 0.420
EAQ05510.1
Hypothetical protein.
       0.418
EAQ05526.1
pH adaption potassium efflux system protein PhaA; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
      
 0.414
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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