Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ05527.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
EAQ05528.1
COG3108 Uncharacterized protein conserved in bacteria.
       0.492
EAQ05521.1
pH adaption potassium efflux system protein PhaG; COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit.
       0.474
EAQ05522.1
pH adaptation potassium efflux system protein PhaF; COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit.
       0.474
EAQ05523.1
pH adaption potassium efflux system protein PhaE; COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
       0.474
EAQ05524.1
pH adaption potassium efflux system protein PhaD; COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
       0.474
EAQ05525.1
pH adaption potassium efflux system protein; COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit.
       0.474
EAQ05526.1
pH adaption potassium efflux system protein PhaA; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
       0.474
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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