STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06269.1Hypothetical protein. (709 aa)    
Predicted Functional Partners:
EAQ06270.1
COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
       0.823
EAQ06274.1
ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
 
     0.681
EAQ06272.1
COG3440 Predicted restriction endonuclease.
       0.657
EAQ06273.1
COG1002 Type II restriction enzyme, methylase subunits.
       0.655
EAQ06276.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
 
     0.523
EAQ06275.1
Probable ATP-dependent helicase Lhr; COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster.
       0.482
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
     
 0.478
EAQ06271.1
Hypothetical protein.
       0.470
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.