Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ06269.1 | EAQ06270.1 | SKA53_04258 | SKA53_04263 | Hypothetical protein. | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | 0.868 |
EAQ06269.1 | EAQ06271.1 | SKA53_04258 | SKA53_04268 | Hypothetical protein. | Hypothetical protein. | 0.470 |
EAQ06269.1 | EAQ06272.1 | SKA53_04258 | SKA53_04273 | Hypothetical protein. | COG3440 Predicted restriction endonuclease. | 0.685 |
EAQ06269.1 | EAQ06273.1 | SKA53_04258 | SKA53_04278 | Hypothetical protein. | COG1002 Type II restriction enzyme, methylase subunits. | 0.585 |
EAQ06269.1 | EAQ06274.1 | SKA53_04258 | SKA53_04283 | Hypothetical protein. | ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.712 |
EAQ06269.1 | EAQ06275.1 | SKA53_04258 | SKA53_04288 | Hypothetical protein. | Probable ATP-dependent helicase Lhr; COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster. | 0.413 |
EAQ06269.1 | EAQ06276.1 | SKA53_04258 | SKA53_04293 | Hypothetical protein. | Hypothetical protein; COG2378 Predicted transcriptional regulator. | 0.477 |
EAQ06270.1 | EAQ06269.1 | SKA53_04263 | SKA53_04258 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | Hypothetical protein. | 0.868 |
EAQ06270.1 | EAQ06271.1 | SKA53_04263 | SKA53_04268 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | Hypothetical protein. | 0.497 |
EAQ06270.1 | EAQ06272.1 | SKA53_04263 | SKA53_04273 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | COG3440 Predicted restriction endonuclease. | 0.599 |
EAQ06270.1 | EAQ06273.1 | SKA53_04263 | SKA53_04278 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | COG1002 Type II restriction enzyme, methylase subunits. | 0.824 |
EAQ06270.1 | EAQ06274.1 | SKA53_04263 | SKA53_04283 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.687 |
EAQ06270.1 | EAQ06276.1 | SKA53_04263 | SKA53_04293 | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | Hypothetical protein; COG2378 Predicted transcriptional regulator. | 0.514 |
EAQ06271.1 | EAQ06269.1 | SKA53_04268 | SKA53_04258 | Hypothetical protein. | Hypothetical protein. | 0.470 |
EAQ06271.1 | EAQ06270.1 | SKA53_04268 | SKA53_04263 | Hypothetical protein. | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | 0.497 |
EAQ06271.1 | EAQ06272.1 | SKA53_04268 | SKA53_04273 | Hypothetical protein. | COG3440 Predicted restriction endonuclease. | 0.773 |
EAQ06271.1 | EAQ06273.1 | SKA53_04268 | SKA53_04278 | Hypothetical protein. | COG1002 Type II restriction enzyme, methylase subunits. | 0.773 |
EAQ06271.1 | EAQ06274.1 | SKA53_04268 | SKA53_04283 | Hypothetical protein. | ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.723 |
EAQ06272.1 | EAQ06269.1 | SKA53_04273 | SKA53_04258 | COG3440 Predicted restriction endonuclease. | Hypothetical protein. | 0.685 |
EAQ06272.1 | EAQ06270.1 | SKA53_04273 | SKA53_04263 | COG3440 Predicted restriction endonuclease. | COG1112 Superfamily I DNA and RNA helicases and helicase subunits. | 0.599 |
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