EAQ06289.1 protein (Yoonia vestfoldensis SKA53)

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EAQ06289.1

COG0211 Ribosomal protein L27. (52 aa)

Predicted Functional Partners:

rplU

0.993

rplM

0.991

rpsI

0.991

rpsB

0.989

rpsJ

0.989

rpmB

0.988

rplL

0.988

rplJ

0.987

rplQ

0.987

rplS

0.987

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ06289.1	rplJ	SKA53_04358	SKA53_13263	COG0211 Ribosomal protein L27.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.987
EAQ06289.1	rplL	SKA53_04358	SKA53_13268	COG0211 Ribosomal protein L27.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.988
EAQ06289.1	rplM	SKA53_04358	SKA53_04443	COG0211 Ribosomal protein L27.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.991
EAQ06289.1	rplQ	SKA53_04358	SKA53_13466	COG0211 Ribosomal protein L27.	COG0203 Ribosomal protein L17.	0.987
EAQ06289.1	rplS	SKA53_04358	SKA53_14971	COG0211 Ribosomal protein L27.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.987
EAQ06289.1	rplU	SKA53_04358	SKA53_04353	COG0211 Ribosomal protein L27.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
EAQ06289.1	rpmB	SKA53_04358	SKA53_09474	COG0211 Ribosomal protein L27.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
EAQ06289.1	rpsB	SKA53_04358	SKA53_04723	COG0211 Ribosomal protein L27.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.989
EAQ06289.1	rpsI	SKA53_04358	SKA53_04448	COG0211 Ribosomal protein L27.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.991
EAQ06289.1	rpsJ	SKA53_04358	SKA53_13323	COG0211 Ribosomal protein L27.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.989
rplJ	EAQ06289.1	SKA53_13263	SKA53_04358	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0211 Ribosomal protein L27.	0.987
rplJ	rplL	SKA53_13263	SKA53_13268	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.998
rplJ	rplM	SKA53_13263	SKA53_04443	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.995
rplJ	rplQ	SKA53_13263	SKA53_13466	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0203 Ribosomal protein L17.	0.992
rplJ	rplS	SKA53_13263	SKA53_14971	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplJ	rplU	SKA53_13263	SKA53_04353	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplJ	rpmB	SKA53_13263	SKA53_09474	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.983
rplJ	rpsB	SKA53_13263	SKA53_04723	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.993
rplJ	rpsI	SKA53_13263	SKA53_04448	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.991
rplJ	rpsJ	SKA53_13263	SKA53_13323	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.991