Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06322.1Hypothetical protein; COG1223 Predicted ATPase (AAA+ superfamily). (287 aa)    
Predicted Functional Partners:
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
     0.829
EAQ06320.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
   
   0.782
EAQ06319.1
Polyphosphate kinase 2, putative.
       0.699
EAQ06323.1
Rhodanese domain protein; COG0607 Rhodanese-related sulfurtransferase.
 
   0.698
EAQ06318.1
Transcriptional regulator, TetR family; COG1309 Transcriptional regulator.
       0.622
EAQ05346.1
ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.568
EAQ06317.1
Hypothetical protein.
       0.539
EAQ05553.1
DNA primase domain protein; COG5519 Superfamily II helicase and inactivated derivatives.
  
     0.530
EAQ05379.1
DNA primase domain protein; COG5519 Superfamily II helicase and inactivated derivatives.
  
     0.527
EAQ07023.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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