STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06344.1Twin-arginine translocation pathway signal sequence domain protein, putative; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (172 aa)    
Predicted Functional Partners:
EAQ06348.1
Hypothetical protein; COG1079 Uncharacterized ABC-type transport system, permease component.
 
     0.693
EAQ06922.1
Hypothetical protein.
  
     0.658
EAQ07862.1
Capsular polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family; COG3524 Capsule polysaccharide export protein.
  
    0.610
EAQ07697.1
Putative capsule polysaccharide exporter; COG1596 Periplasmic protein involved in polysaccharide export.
  
    0.600
EAQ06342.1
Hypothetical protein; COG2068 Uncharacterized MobA-related protein.
       0.573
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
    0.559
EAQ06347.1
COG0113 Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.552
EAQ06343.1
Aminomethyl transferase family protein; COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
       0.550
EAQ07861.1
Capsular polysaccharide export ATP-binding protein; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
   
    0.520
EAQ06715.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.491
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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