Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06345.1Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. (332 aa)    
Predicted Functional Partners:
EAQ07897.1
COG0835 Chemotaxis signal transduction protein.
 
 0.996
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
 0.992
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
 0.992
EAQ08009.1
COG0642 Signal transduction histidine kinase.
 
 0.992
EAQ07895.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.986
EAQ07896.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.986
EAQ07898.1
Hypothetical protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.980
EAQ07901.1
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.980
EAQ07462.1
Sensory box-containing diguanylate cyclase, putative; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.964
EAQ07807.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
 
 0.964
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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