STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06351.1DSBA-like thioredoxin family protein; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis. (214 aa)    
Predicted Functional Partners:
EAQ06350.1
Multidrug (bicyclomycin) efflux pump, major facilitator superfamily (MFS); COG0477 Permeases of the major facilitator superfamily.
 
 
   0.842
EAQ06352.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
       0.706
EAQ05954.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
    
   0.632
EAQ05956.1
Hypothetical protein; COG1393 Arsenate reductase and related proteins, glutaredoxin family; Belongs to the ArsC family.
    
   0.632
EAQ08089.1
NADPH-dependent FMN reductase domain protein; COG0431 Predicted flavoprotein.
 
    0.521
EAQ08081.1
Homocysteine S-methyltransferase family protein; COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent).
   
    0.465
EAQ05868.1
Probable reductase; COG0431 Predicted flavoprotein.
  
    0.451
EAQ07969.1
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
  
    0.451
EAQ06338.1
COG1495 Disulfide bond formation protein DsbB.
  
  
 0.430
EAQ07060.1
Multidrug efflux pump, major facilitator superfamily (MFS); COG0477 Permeases of the major facilitator superfamily.
 
 
   0.413
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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