STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06353.1ABC transporter, periplasmic substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component. (610 aa)    
Predicted Functional Partners:
EAQ06084.1
Oligopeptide/dipeptide uptake family ABC transporter, permease protein; COG4239 ABC-type uncharacterized transport system, permease component.
 
 
 0.881
EAQ06085.1
ABC peptide transporter, inner membrane subunit; COG4174 ABC-type uncharacterized transport system, permease component.
 
  
 0.839
EAQ06083.1
ABC peptide transporter, fused ATPase domains; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.736
EAQ07494.1
Peptide ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.707
EAQ06217.1
Oligopeptide ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
 0.668
EAQ05322.1
ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.627
EAQ06219.1
Oligopeptide/dipeptide ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.627
EAQ05709.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.627
EAQ08014.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.627
EAQ07496.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.627
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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