STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06365.1Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. (352 aa)    
Predicted Functional Partners:
EAQ06366.1
Hypothetical protein.
    0.926
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.857
EAQ06885.1
epsK domain protein.
  
 
  0.792
EAQ06884.1
Hypothetical protein.
 
   
 0.763
EAQ06634.1
Hypothetical protein.
  
     0.751
EAQ06958.1
Hypothetical protein.
  
     0.728
EAQ05914.1
Hypothetical protein.
  
     0.726
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.718
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.715
EAQ06633.1
Hypothetical protein.
  
     0.706
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.