STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06372.1Predicted ferripyochelin binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily. (173 aa)    
Predicted Functional Partners:
EAQ06688.1
Carbonic anhydrase, putative; COG0288 Carbonic anhydrase.
    
 0.977
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.860
EAQ06374.1
Hypothetical protein.
       0.773
EAQ06375.1
Hypothetical protein.
       0.681
EAQ06093.1
COG0381 UDP-N-acetylglucosamine 2-epimerase.
    
  0.522
folE2
Hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
 
  
 0.519
EAQ05330.1
Dihydropyrimidinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.441
EAQ08181.1
Dihydropyrimidinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.441
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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