Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ06375.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
EAQ07554.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
    0.842
EAQ06372.1
Predicted ferripyochelin binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
       0.678
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.678
EAQ08165.1
COG3144 Flagellar hook-length control protein.
  
    0.620
EAQ06738.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.584
EAQ05891.1
Hypothetical protein; COG5462 Predicted secreted (periplasmic) protein.
  
     0.569
EAQ05835.1
Glycosyltransferase, family 2; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
    0.556
EAQ07166.1
Possible flagellar switch protein FliM; COG0477 Permeases of the major facilitator superfamily.
  
    0.515
EAQ05274.1
COG1536 Flagellar motor switch protein.
  
    0.512
EAQ06374.1
Hypothetical protein.
       0.503
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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