STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06382.1ABC branched-chain amino acid transporter family, inner membrane subunit; COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. (336 aa)    
Predicted Functional Partners:
EAQ06383.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
EAQ06380.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.998
EAQ06381.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.998
EAQ06379.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
  0.997
EAQ08134.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.951
EAQ08136.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.945
EAQ08132.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.924
EAQ05575.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.880
EAQ06011.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.880
EAQ06010.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 
  0.871
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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