Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06392.1Nitrogen regulation protein NtrB; COG3852 Signal transduction histidine kinase, nitrogen specific. (358 aa)    
Predicted Functional Partners:
EAQ06391.1
Nitrogen metabolism transcriptional regulator, NtrC; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 0.996
EAQ05266.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
  
 0.941
EAQ06655.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
  
 0.941
EAQ05201.1
Sensory box sensor histidine kianse/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.940
EAQ06389.1
Nitrogen assimilation regulatory protein NtrX; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.927
EAQ06393.1
tRNA-dihydrouridine synthase, putative; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
  
 0.918
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.917
EAQ08009.1
COG0642 Signal transduction histidine kinase.
 
 
 0.909
EAQ05433.1
C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
 0.902
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
    
 0.880
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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