STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06416.1COG2963 Transposase and inactivated derivatives. (124 aa)    
Predicted Functional Partners:
EAQ06417.1
Helix-turn-helix, Fis-type protein; COG2801 Transposase and inactivated derivatives.
 
    0.957
EAQ06414.1
70 kDa peroxisomal membrane protein; COG3436 Transposase and inactivated derivatives.
     
 0.529
EAQ06415.1
Hypothetical protein.
       0.523
EAQ08219.1
Hypothetical protein.
  
     0.429
EAQ08255.1
Hypothetical protein.
  
     0.404
EAQ06413.1
Unknown protein encoded by ISEc8 within prophage; COG3436 Transposase and inactivated derivatives.
     
 0.401
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.