STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06419.1Probable polysaccharide biosynthesis related protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (440 aa)    
Predicted Functional Partners:
EAQ07209.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.898
EAQ07210.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.898
EAQ07207.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.895
EAQ06422.1
Glycosyltransferase, group 1; COG0438 Glycosyltransferase.
 
 
 0.872
EAQ06423.1
Glycosyl hydrolase domain protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family.
  
 
 0.855
EAQ06420.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.816
EAQ06421.1
Hypothetical protein.
       0.773
EAQ06431.1
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.769
EAQ07388.1
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.769
EAQ06425.1
Hypothetical protein; COG2236 Predicted phosphoribosyltransferases.
       0.744
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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