STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06422.1Glycosyltransferase, group 1; COG0438 Glycosyltransferase. (632 aa)    
Predicted Functional Partners:
EAQ06419.1
Probable polysaccharide biosynthesis related protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.872
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.857
EAQ06423.1
Glycosyl hydrolase domain protein; COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family.
 
     0.825
EAQ06420.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.811
EAQ06421.1
Hypothetical protein.
       0.773
EAQ06424.1
Hypothetical protein.
  
    0.764
EAQ06425.1
Hypothetical protein; COG2236 Predicted phosphoribosyltransferases.
       0.741
EAQ06418.1
Hypothetical protein.
       0.590
EAQ07209.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.553
EAQ06426.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
  
    0.529
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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