STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06433.1Undecaprenyl-phosphate galactosephosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis. (222 aa)    
Predicted Functional Partners:
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.986
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.986
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.984
EAQ06434.1
Putative UTP--glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
    
 0.829
EAQ07697.1
Putative capsule polysaccharide exporter; COG1596 Periplasmic protein involved in polysaccharide export.
  
 
 0.765
gmd
NAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.662
EAQ06785.1
Zinc carboxypeptidase A metalloprotease (M14); COG0438 Glycosyltransferase.
  
  
 0.644
EAQ06419.1
Probable polysaccharide biosynthesis related protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.633
EAQ08148.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.624
EAQ06440.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
  
 0.602
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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