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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06439.1COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (270 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.881
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
    0.847
EAQ06440.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.838
EAQ06441.1
Hypothetical protein; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase.
       0.773
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.744
EAQ08009.1
COG0642 Signal transduction histidine kinase.
   
 
 0.724
EAQ06345.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
   
 
 0.695
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
   
 
 0.695
EAQ05201.1
Sensory box sensor histidine kianse/response regulator; COG0642 Signal transduction histidine kinase.
     
 0.604
EAQ06443.1
Hypothetical protein.
  
    0.523
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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