Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06439.1COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (270 aa)    
Predicted Functional Partners:
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
    0.847
EAQ06440.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.836
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.805
EAQ06441.1
Hypothetical protein; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase.
       0.773
EAQ06443.1
Hypothetical protein.
  
    0.523
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
       0.514
EAQ06437.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.473
EAQ08107.1
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.430
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
  
 0.420
gpsA
COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.411
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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