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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06440.1Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes. (448 aa)    
Predicted Functional Partners:
EAQ06438.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.971
EAQ06439.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
 
     0.838
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.809
EAQ06441.1
Hypothetical protein; COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase.
       0.773
EAQ07697.1
Putative capsule polysaccharide exporter; COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.712
EAQ08168.1
Hypothetical protein.
  
 
 0.684
EAQ06785.1
Zinc carboxypeptidase A metalloprotease (M14); COG0438 Glycosyltransferase.
  
 
 0.671
EAQ05620.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.660
EAQ06986.1
Hypothetical protein of glycosyltransferase family; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases.
  
 
 0.654
EAQ05616.1
Putative glycosyltransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.602
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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