STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06443.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
EAQ07407.1
COG1291 Flagellar motor component.
  
 0.996
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.962
EAQ07897.1
COG0835 Chemotaxis signal transduction protein.
  
 
 0.909
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
   
   0.883
EAQ08009.1
COG0642 Signal transduction histidine kinase.
  
 
 0.861
EAQ06345.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
 0.847
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
  
 
 0.847
EAQ07895.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.830
EAQ07896.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
  
 
 0.830
EAQ06517.1
COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.823
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.