Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ06443.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
EAQ07407.1
COG1291 Flagellar motor component.
  
 0.971
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.963
EAQ07897.1
COG0835 Chemotaxis signal transduction protein.
  
 
 0.928
EAQ06442.1
Hypothetical protein; COG2252 Permeases.
   
   0.898
EAQ08009.1
COG0642 Signal transduction histidine kinase.
  
 
 0.890
EAQ06345.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
 0.882
EAQ06346.1
Methyl-accepting chemotaxis protein McpD; COG2202 FOG: PAS/PAC domain.
  
 
 0.882
EAQ06517.1
COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.863
EAQ06858.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
 
  0.863
EAQ07901.1
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.850
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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