STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06453.1Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (343 aa)    
Predicted Functional Partners:
EAQ06330.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 0.999
EAQ05435.1
COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
   
 0.995
EAQ06454.1
Iron-sulfur cluster assembly transcription factor IscR, putative; COG1959 Predicted transcriptional regulator.
 
 
 0.990
EAQ07271.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
  
 0.937
EAQ05467.1
COG2124 Cytochrome P450.
  
 0.926
EAQ06824.1
Molybdopterin biosynthesis protein MoeB, putative; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
   
 0.919
EAQ05493.1
COG0633 Ferredoxin.
  
 0.917
EAQ05921.1
Iron-sulfur cluster-binding protein; COG0633 Ferredoxin.
  
 0.917
EAQ06745.1
Thiosulfate sulfurtransferase, Rhodanese-like; COG2897 Rhodanese-related sulfurtransferase.
   
 0.914
EAQ06206.1
COG0236 Acyl carrier protein.
    
 
 0.905
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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