EAQ06482.1 protein (Yoonia vestfoldensis SKA53)

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Score

EAQ06482.1

ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains. (602 aa)

Predicted Functional Partners:

rplU

0.795

EAQ07822.1

0.795

rpsC

0.793

rplT

0.790

rpsO

0.789

rpmD

0.788

rpmH

0.786

rpsJ

0.783

rplC

0.783

rpsS

0.782

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ06482.1	EAQ07822.1	SKA53_05323	SKA53_13333	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	COG0088 Ribosomal protein L4.	0.795
EAQ06482.1	rplC	SKA53_05323	SKA53_13328	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.783
EAQ06482.1	rplT	SKA53_05323	SKA53_10219	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.790
EAQ06482.1	rplU	SKA53_05323	SKA53_04353	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.795
EAQ06482.1	rpmD	SKA53_05323	SKA53_13431	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	COG1841 Ribosomal protein L30/L7E.	0.788
EAQ06482.1	rpmH	SKA53_05323	SKA53_00405	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.786
EAQ06482.1	rpsC	SKA53_05323	SKA53_13361	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.793
EAQ06482.1	rpsJ	SKA53_05323	SKA53_13323	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.783
EAQ06482.1	rpsO	SKA53_05323	SKA53_12563	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.789
EAQ06482.1	rpsS	SKA53_05323	SKA53_13351	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.782
EAQ07822.1	EAQ06482.1	SKA53_13333	SKA53_05323	COG0088 Ribosomal protein L4.	ABC transporter, ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.	0.795
EAQ07822.1	rplC	SKA53_13333	SKA53_13328	COG0088 Ribosomal protein L4.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
EAQ07822.1	rplT	SKA53_13333	SKA53_10219	COG0088 Ribosomal protein L4.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
EAQ07822.1	rplU	SKA53_13333	SKA53_04353	COG0088 Ribosomal protein L4.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
EAQ07822.1	rpmD	SKA53_13333	SKA53_13431	COG0088 Ribosomal protein L4.	COG1841 Ribosomal protein L30/L7E.	0.995
EAQ07822.1	rpmH	SKA53_13333	SKA53_00405	COG0088 Ribosomal protein L4.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.937
EAQ07822.1	rpsC	SKA53_13333	SKA53_13361	COG0088 Ribosomal protein L4.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
EAQ07822.1	rpsJ	SKA53_13333	SKA53_13323	COG0088 Ribosomal protein L4.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
EAQ07822.1	rpsO	SKA53_13333	SKA53_12563	COG0088 Ribosomal protein L4.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
EAQ07822.1	rpsS	SKA53_13333	SKA53_13351	COG0088 Ribosomal protein L4.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997