Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAQ05290.1 | EAQ06485.1 | SKA53_05925 | SKA53_05338 | Putative quinoprotein; COG1520 FOG: WD40-like repeat. | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | 0.926 |
| EAQ05290.1 | EAQ07973.1 | SKA53_05925 | SKA53_09624 | Putative quinoprotein; COG1520 FOG: WD40-like repeat. | COG3159 Uncharacterized protein conserved in bacteria. | 0.496 |
| EAQ05290.1 | bamA | SKA53_05925 | SKA53_04063 | Putative quinoprotein; COG1520 FOG: WD40-like repeat. | Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.987 |
| EAQ05290.1 | bamD | SKA53_05925 | SKA53_07207 | Putative quinoprotein; COG1520 FOG: WD40-like repeat. | Competence lipoprotein ComL, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.976 |
| EAQ05296.1 | EAQ06485.1 | SKA53_05955 | SKA53_05338 | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | 0.553 |
| EAQ06485.1 | EAQ05290.1 | SKA53_05338 | SKA53_05925 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Putative quinoprotein; COG1520 FOG: WD40-like repeat. | 0.926 |
| EAQ06485.1 | EAQ05296.1 | SKA53_05338 | SKA53_05955 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain. | 0.553 |
| EAQ06485.1 | EAQ06486.1 | SKA53_05338 | SKA53_05343 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Hypothetical protein; COG1279 Lysine efflux permease. | 0.785 |
| EAQ06485.1 | EAQ07040.1 | SKA53_05338 | SKA53_01551 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | 0.696 |
| EAQ06485.1 | EAQ07655.1 | SKA53_05338 | SKA53_12498 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.548 |
| EAQ06485.1 | EAQ07778.1 | SKA53_05338 | SKA53_13113 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Hypothetical protein. | 0.687 |
| EAQ06485.1 | EAQ07973.1 | SKA53_05338 | SKA53_09624 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | COG3159 Uncharacterized protein conserved in bacteria. | 0.548 |
| EAQ06485.1 | bamA | SKA53_05338 | SKA53_04063 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Putative outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.962 |
| EAQ06485.1 | bamD | SKA53_05338 | SKA53_07207 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | Competence lipoprotein ComL, putative; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.969 |
| EAQ06485.1 | recO | SKA53_05338 | SKA53_13118 | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.550 |
| EAQ06486.1 | EAQ06485.1 | SKA53_05343 | SKA53_05338 | Hypothetical protein; COG1279 Lysine efflux permease. | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | 0.785 |
| EAQ06486.1 | EAQ07655.1 | SKA53_05343 | SKA53_12498 | Hypothetical protein; COG1279 Lysine efflux permease. | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.630 |
| EAQ06486.1 | EAQ07778.1 | SKA53_05343 | SKA53_13113 | Hypothetical protein; COG1279 Lysine efflux permease. | Hypothetical protein. | 0.469 |
| EAQ07040.1 | EAQ06485.1 | SKA53_01551 | SKA53_05338 | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | Lipoprotein, SmpA/OmlA family; COG2913 Small protein A (tmRNA-binding). | 0.696 |
| EAQ07040.1 | EAQ07655.1 | SKA53_01551 | SKA53_12498 | DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. | Hypothetical protein; COG1466 DNA polymerase III, delta subunit. | 0.445 |
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