STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06502.1Iron-sulfur cluster assembly family protein; Belongs to the HesB/IscA family. (116 aa)    
Predicted Functional Partners:
EAQ06330.1
Hypothetical protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 
 0.904
EAQ06453.1
Putative aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
 
 0.873
EAQ06503.1
COG0708 Exonuclease III.
     
 0.856
EAQ06924.1
COG0354 Predicted aminomethyltransferase related to GcvT; Belongs to the GcvT family.
 
 
 0.830
EAQ06501.1
Deoxyguanosinetriphosphate triphosphohydrolase, putative; COG0232 dGTP triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
     
 0.765
EAQ06806.1
nifU domain protein; COG0694 Thioredoxin-like proteins and domains.
 
 
 0.760
argS
COG0018 Arginyl-tRNA synthetase.
     
 0.731
EAQ07068.1
Putative heat shock protein DnaJ; COG1076 DnaJ-domain-containing proteins 1.
  
 
 0.694
EAQ07311.1
COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.689
EAQ06770.1
COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
  
 0.654
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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