STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06507.1ATPase, AAA family; COG0714 MoxR-like ATPases. (279 aa)    
Predicted Functional Partners:
EAQ06510.1
COG3825 Uncharacterized protein conserved in bacteria.
 
    0.942
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
  
 
 0.765
EAQ06508.1
Hypothetical protein.
       0.760
EAQ06509.1
Hypothetical protein.
       0.662
EAQ06506.1
Hypothetical protein.
       0.574
EAQ08083.1
Hypothetical protein.
  
    0.498
EAQ06511.1
Peptidase, M48 family; COG0501 Zn-dependent protease with chaperone function.
  
    0.479
EAQ07913.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.467
EAQ06712.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.441
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.